issue and script tag above it

Hello all,

I have an interesting problem to resolve....here it is...

Our SharePoint site has a federated authentication (Extranet Zone). When users type in the url it goes to the junction box (TAM/PING). Basically what all it does is check the user for authentication and transfer (not redirect ) it to the IIS Web application. During this process this Junction box is adding a script (<script lang='javascript'> blah blah </script>) just above the <!DOCTYPE...> ELEMENT.

Since we are not supposed to have anything above the <!DOCTYPE..>...this is obviously screwing up the content in the site because the CSS is out of wack. If we visit the site without junction box transfer (default zone) the site is fine becasue <!DOCTYPE>  is still the top line.

Now the challenge....

How can I move the script tag added by the Junction box below the <!DOCTYPE> element. Keep in mind we are not asking anything with the Junction box administrators ( I do not make the rules here).

Is this possible? tweaking our Master page?

-Satyen

Satyen Kasturi